PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15468
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 439aa    MW: 46669.2 Da    PI: 4.5059
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15468genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.83e-25541972127
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek..ewyfFskrdkkyatgkrknratk..sgyWk.atgkdkevlsk. 95 
               ppGfrF Pt++e++ +yL +k++g+    +++i e  +y+++P  L  k ++ ++   + yf s+r++ky++g r++r tk   g+Wk +tgk+ e     
  EMT15468  54 PPGFRFMPTEDEMIRYYLLPKLQGRAYVPNNAIIEDSVYQCHPDGLTsKYMDRGQAgrSFYFLSPRERKYKNGVRPRRDTKdrLGRWKaSTGKTDERGGGd 154
               89************************7777889999**********955554443333779*****************887557****5578866544334 PP

       NAM  96 .........kgelvglkktLvfy..kgrapkgektdWvmheyr 127
                        +g+++ +k  L+++  +gr +k +k+ W+m+e +
  EMT15468 155 vrkeervagDGTTKYCKSGLAYFyfRGRGEKEKKSGWLMQELT 197
               44446666666669******9877899*************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-2750225IPR003441NAC domain
PROSITE profilePS5100529.78753227IPR003441NAC domain
PfamPF023651.0E-1354196IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MAAEEGDGEE DKAIVVGAGD TAEEEIVAGA DEEEEMHGGW DGGGGGGDGM FRPPPGFRFM  60
PTEDEMIRYY LLPKLQGRAY VPNNAIIEDS VYQCHPDGLT SKYMDRGQAG RSFYFLSPRE  120
RKYKNGVRPR RDTKDRLGRW KASTGKTDER GGGDVRKEER VAGDGTTKYC KSGLAYFYFR  180
GRGEKEKKSG WLMQELTVPE YEIKLPEKGG PGGPTLDRYV MYKIYPAPVG RKKRNNDDEA  240
GPSNAEAAES DDEGETAELP PMLSDKQAGK RPKQPETDEM LEKRVLEQKP GGIPLDAAAA  300
AAAADGVDDA PAAAMDDGVH DAAAADFGGS NADCNPDAGG KAPQFSLDDF YASQAAEHYR  360
RSRAVLPATS GSPGEAAPVK ADGSPDSTVV SAVGSGDGNN ANHDRAESAA VKASPGGSAS  420
AEDEITPNMV GLGDRCSIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-135419816140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236909.17e-56PREDICTED: uncharacterized protein LOC104584324
TrEMBLN1R0H20.0N1R0H2_AEGTA; NAC domain-containing protein 29
STRINGSi032881m3e-49(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP143612024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.13e-13NAC domain containing protein 45